Phylogeny of birds (1 Viewer)

Peter Kovalik

Well-known member

• Oct 9, 2012

• #1

John E. McCormack, Michael G. Harvey, Brant C. Faircloth, Nicholas G. Crawford, Travis C. Glenn, Robb T. Brumfield, 2012. A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing.
Abstract
PDF

 

njlarsen

Gallery Moderator

Opus Editor

Supporter

• Oct 9, 2012

• #2

That does contain a couple of fun surprises!

Niels

 

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Ben Wielstra

Well-known member

• Oct 12, 2012

• #3

In which journal is this published?

 

Richard Klim

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• Oct 22, 2012

• #4

David Ringer, 10,000 Birds: Tropicbird-Sunbittern relationship hypothesized in new paper.

 

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Ben Wielstra

Well-known member

• Oct 22, 2012

• #5

"The latest of these, “A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing” by John E. McCormack et al., isn’t even officially published yet, but its authors made it available this month on a manuscript server called arXiv (a practice which, by the way, is still regarded with some uncertainty but appears to be gaining popularity)."

I was not familiar with arXiv but this manuscript must be accepted for publication I reckon. Systematic Biology or something?

 

Richard Klim

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• Oct 23, 2012

• #6

TiF

John Boyd (TiF): www.jboyd.net/Taxo/changes.html [23 Oct 2012]

 

Richard Klim

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• Jan 31, 2013

• #7

McCormack et al 2013

Peter Kovalik said:

John E. McCormack, Michael G. Harvey, Brant C. Faircloth, Nicholas G. Crawford, Travis C. Glenn, Robb T. Brumfield, 2012. A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing.
Abstract
PDF

Click to expand...

Published 29 Jan 2013...

• PLOS ONE 8(1): e54848. [article] [pdf]

 

Peter Kovalik

Well-known member

• Jul 29, 2014

• #8

The avian phylogenomic project data

Zhang, G; Li,B; Li,C; Gilbert,MTP; Jarvis,E; The Avian Genome Consortium; Wang,J. (2014): The avian phylogenomic project data. GigaScience Database. http://dx.doi.org/10.5524/101000

Phylogenomic analysis of Birds

 

Richard Klim

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• Dec 2, 2014

• #9

Forthcoming

In press...

• Jarvis et al. Whole genome analyses resolve the early branches to the Tree of Life of modern birds. Science.
  
  
• Zhang et al. Comparative genomics reveals insights into avian genome evolution and adaptation. Science.

 

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Snapdragyn

Well-known member

• Dec 2, 2014

• #10

Richard Klim said:

In press...

• Jarvis et al. Whole genome analyses resolve the early branches to the Tree of Life of modern birds. Science.
  
  
• Zhang et al. Comparative genomics reveals insights into avian genome evolution and adaptation. Science.

Click to expand...

Wow, when they say 'et al.', they should just say 'et ALL'!

 

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Ben Wielstra

Well-known member

• Dec 3, 2014

• #11

Wow, exciting stuff!

 

Richard Klim

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• Dec 8, 2014

• #12

BirdTree.org

Rubolini, Liker, Garamszegi, Møller & Saino (in press). Using the BirdTree.org website to obtain robust phylogenies for avian comparative studies: A primer. Curr Zool. [pdf]

 

M

mgharvey

Member

• Dec 11, 2014

• #13

Bird genome phylogeny published

The phylogeny based on 48 bird genomes was just released:

http://dx.doi.org/10.1126/science.1253451

See the project website for details on all 29(!) papers just released based on these genome sequences:

http://avian.genomics.cn/en

 

Richard Klim

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• Dec 21, 2014

• #14

Jarvis et al 2014

mgharvey said:

The phylogeny based on 48 bird genomes was just released: dx.doi.org/10.1126/science.1253451

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David Ringer, 10,000 Birds, 21 Dec 2014: Here’s the new bird family tree. It’s amazing.

 

mb1848

Well-known member

• Dec 22, 2014

• #15

Any one else notice that all the Galloanserae taste delicious?

 

Kirk Roth

Rarely to be taken seriously

• Dec 22, 2014

• #16

mb1848 said:

Any one else notice that all the Galloanserae taste delicious?

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You've never had merganser, I see...

 

Nutcracker

Stop Brexit!

• Dec 22, 2014

• #17

mb1848 said:

Any one else notice that all the Galloanserae taste delicious?

Click to expand...

Or Turkey


:flyaway:

 

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Ben Wielstra

Well-known member

• Dec 23, 2014

• #18

From the perspective in Science: "At BGI, the genomes of about 200 more birds are done and waiting to be analyzed, with thousands more planned." Pretty cool.

 

IamWhoIam

Active member

• Dec 23, 2014

• #19

Ben Wielstra said:

From the perspective in Science: "At BGI, the genomes of about 200 more birds are done and waiting to be analyzed, with thousands more planned." Pretty cool.

Click to expand...

its actually 10000 birds genome project. in incoming years they will sequence whole genome of all living species of birds and put it available to all public and scientist all around globe. by the way regards from serbia, I was on your presentation few years ago

 

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Ben Wielstra

Well-known member

• Dec 23, 2014

• #20

The one that went horribly wrong? ;-)