Phylogeny of birds (3 Viewers)

[Peter Kovalik]

John E. McCormack, Michael G. Harvey, Brant C. Faircloth, Nicholas G. Crawford, Travis C. Glenn, Robb T. Brumfield, 2012. A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing.
Abstract
PDF

 

[njlarsen]

That does contain a couple of fun surprises!

Niels

 

[Ben Wielstra]

In which journal is this published?

 

[Richard Klim]

David Ringer, 10,000 Birds: Tropicbird-Sunbittern relationship hypothesized in new paper.

 

[Ben Wielstra]

"The latest of these, “A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing” by John E. McCormack et al., isn’t even officially published yet, but its authors made it available this month on a manuscript server called arXiv (a practice which, by the way, is still regarded with some uncertainty but appears to be gaining popularity)."

I was not familiar with arXiv but this manuscript must be accepted for publication I reckon. Systematic Biology or something?

 

[Richard Klim]

TiF

John Boyd (TiF): www.jboyd.net/Taxo/changes.html [23 Oct 2012]

 

[Richard Klim]

McCormack et al 2013

John E. McCormack, Michael G. Harvey, Brant C. Faircloth, Nicholas G. Crawford, Travis C. Glenn, Robb T. Brumfield, 2012. A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing.
Abstract
PDF

Published 29 Jan 2013...

• PLOS ONE 8(1): e54848. [article] [pdf]

 

[Peter Kovalik]

The avian phylogenomic project data

Zhang, G; Li,B; Li,C; Gilbert,MTP; Jarvis,E; The Avian Genome Consortium; Wang,J. (2014): The avian phylogenomic project data. GigaScience Database. http://dx.doi.org/10.5524/101000

Phylogenomic analysis of Birds

 

[Richard Klim]

Forthcoming

In press...

• Jarvis et al. Whole genome analyses resolve the early branches to the Tree of Life of modern birds. Science.
  
  
• Zhang et al. Comparative genomics reveals insights into avian genome evolution and adaptation. Science.

 

[Snapdragyn]

In press...

• Jarvis et al. Whole genome analyses resolve the early branches to the Tree of Life of modern birds. Science.
  
  
• Zhang et al. Comparative genomics reveals insights into avian genome evolution and adaptation. Science.

Wow, when they say 'et al.', they should just say 'et ALL'!

 

[Ben Wielstra]

Wow, exciting stuff!

 

[Richard Klim]

BirdTree.org

Rubolini, Liker, Garamszegi, Møller & Saino (in press). Using the BirdTree.org website to obtain robust phylogenies for avian comparative studies: A primer. Curr Zool. [pdf]

 

[mgharvey]

Bird genome phylogeny published

The phylogeny based on 48 bird genomes was just released:

http://dx.doi.org/10.1126/science.1253451

See the project website for details on all 29(!) papers just released based on these genome sequences:

http://avian.genomics.cn/en

 

[Richard Klim]

Jarvis et al 2014

The phylogeny based on 48 bird genomes was just released: dx.doi.org/10.1126/science.1253451

David Ringer, 10,000 Birds, 21 Dec 2014: Here’s the new bird family tree. It’s amazing.

 

[mb1848]

Any one else notice that all the Galloanserae taste delicious?

 

[Kirk Roth]

Any one else notice that all the Galloanserae taste delicious?

You've never had merganser, I see...

 

[Nutcracker]

Any one else notice that all the Galloanserae taste delicious?

Or Turkey


:flyaway:

 

[Ben Wielstra]

From the perspective in Science: "At BGI, the genomes of about 200 more birds are done and waiting to be analyzed, with thousands more planned." Pretty cool.

 

[IamWhoIam]

From the perspective in Science: "At BGI, the genomes of about 200 more birds are done and waiting to be analyzed, with thousands more planned." Pretty cool.

its actually 10000 birds genome project. in incoming years they will sequence whole genome of all living species of birds and put it available to all public and scientist all around globe. by the way regards from serbia, I was on your presentation few years ago

 

[Ben Wielstra]

The one that went horribly wrong? ;-)